Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 AL390755.1-201ENST00000623716 2027 ntBASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFAF3Q9BU61 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 INTS4P1-201ENST00000438455 1935 ntBASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 AP003680.1-201ENST00000598970 3660 ntBASIC12.48□□□□□ -0.41
NDUFAF3Q9BU61 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 HLA-A-201ENST00000376802 1334 ntBASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AL590627.1-203ENST00000421194 1026 ntBASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms