Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.22□□□□□ -0.13
VRK1Q99986 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.22□□□□□ -0.13
VRK1Q99986 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 AC093512.1-201ENST00000617969 520 ntBASIC14.22□□□□□ -0.13
VRK1Q99986 AC009093.7-201ENST00000623853 1223 ntBASIC14.22□□□□□ -0.13
VRK1Q99986 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VRK1Q99986 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.21□□□□□ -0.13
VRK1Q99986 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.21□□□□□ -0.13
VRK1Q99986 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 AC093520.2-201ENST00000561830 333 ntBASIC14.21□□□□□ -0.13
VRK1Q99986 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.21□□□□□ -0.13
VRK1Q99986 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.21□□□□□ -0.13
VRK1Q99986 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VRK1Q99986 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VRK1Q99986 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
VRK1Q99986 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.21□□□□□ -0.14
VRK1Q99986 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VRK1Q99986 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VRK1Q99986 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.21□□□□□ -0.14
VRK1Q99986 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.21□□□□□ -0.14
VRK1Q99986 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VRK1Q99986 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VRK1Q99986 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
VRK1Q99986 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VRK1Q99986 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK1Q99986 MIR770-201ENST00000390219 98 ntBASIC14.2□□□□□ -0.14
VRK1Q99986 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.2□□□□□ -0.14
VRK1Q99986 SPCS2P4-201ENST00000436160 681 ntBASIC14.2□□□□□ -0.14
VRK1Q99986 RBPMS2P1-201ENST00000437762 623 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms