Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CPNE1Q99829 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE1Q99829 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 REXO1L1P-202ENST00000608646 1974 ntBASIC16■□□□□ 0.15
CPNE1Q99829 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 AC004987.2-201ENST00000395959 1148 ntBASIC16■□□□□ 0.15
CPNE1Q99829 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16■□□□□ 0.15
CPNE1Q99829 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16■□□□□ 0.15
CPNE1Q99829 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16■□□□□ 0.15
CPNE1Q99829 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16■□□□□ 0.15
CPNE1Q99829 AC008267.7-201ENST00000624570 1194 ntBASIC16■□□□□ 0.15
CPNE1Q99829 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CPNE1Q99829 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 BID-213ENST00000615414 2236 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16■□□□□ 0.15
CPNE1Q99829 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16■□□□□ 0.15
CPNE1Q99829 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE1Q99829 ZNF259P1-201ENST00000407656 1365 ntBASIC16■□□□□ 0.15
CPNE1Q99829 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CPNE1Q99829 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE1Q99829 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CPNE1Q99829 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CPNE1Q99829 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CPNE1Q99829 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC018892.3-201ENST00000623986 2499 ntBASIC15.99■□□□□ 0.15
CPNE1Q99829 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE1Q99829 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE1Q99829 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.99■□□□□ 0.15
CPNE1Q99829 RNA5SP416-201ENST00000516838 111 ntBASIC15.99■□□□□ 0.15
CPNE1Q99829 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE1Q99829 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE1Q99829 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE1Q99829 AC092865.6-201ENST00000642101 219 ntBASIC15.99■□□□□ 0.15
CPNE1Q99829 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CPNE1Q99829 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
CPNE1Q99829 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms