Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 LINC02228-204ENST00000642115 2962 ntBASIC15.18■□□□□ 0.02
COL21A1Q96P44 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC079140.1-201ENST00000508039 487 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 PRYP6-201ENST00000514804 343 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 KRT8P48-201ENST00000515599 1220 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC243562.1-201ENST00000560672 389 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC105339.1-204ENST00000636249 355 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 AC013268.4-201ENST00000637413 2228 ntBASIC15.17■□□□□ 0.02
COL21A1Q96P44 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COL21A1Q96P44 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL21A1Q96P44 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC004967.1-201ENST00000453589 447 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 IGHV3-62-201ENST00000520057 340 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC022145.2-201ENST00000598203 171 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC055717.3-201ENST00000622967 595 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC008267.7-201ENST00000624570 1194 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms