Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AP006294.1-201ENST00000415407 339 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ARSEP1-201ENST00000420443 635 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AL139010.1-201ENST00000454878 894 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 POU5F1P6-201ENST00000466990 990 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 AL359881.2-201ENST00000602973 570 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 SLC7A15P-201ENST00000424028 1363 ntBASIC13.02□□□□□ -0.33
ZNF48Q96MX3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF48Q96MX3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ATP5G2P4-201ENST00000442175 420 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 RN7SL752P-201ENST00000463779 287 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 GIMAP3P-201ENST00000495150 836 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SDHAP3-202ENST00000515467 728 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC023310.3-201ENST00000557027 670 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC100756.1-201ENST00000562736 682 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC138749.3-201ENST00000567691 622 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC132938.2-201ENST00000579188 680 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC116165.1-201ENST00000611806 668 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AL591163.1-201ENST00000641757 987 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 LINC01144-201ENST00000626198 1710 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 AC005622.1-201ENST00000636801 1703 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF48Q96MX3 ALOX12P2-203ENST00000570921 1945 ntBASIC13.01□□□□□ -0.33
ZNF48Q96MX3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms