Protein–RNA interactions for Protein: Q96L91

EP400, E1A-binding protein p400, humanhuman

Predictions only

Length 3,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EP400Q96L91 AL023803.2-201ENST00000620080 638 ntBASIC20.2■□□□□ 0.82
EP400Q96L91 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.19■□□□□ 0.82
EP400Q96L91 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 FAM8A4P-201ENST00000435433 1213 ntBASIC20.19■□□□□ 0.82
EP400Q96L91 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.19■□□□□ 0.82
EP400Q96L91 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.19■□□□□ 0.82
EP400Q96L91 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.19■□□□□ 0.82
EP400Q96L91 ENPP7P14-201ENST00000621765 1040 ntBASIC20.19■□□□□ 0.82
EP400Q96L91 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
EP400Q96L91 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.19■□□□□ 0.82
EP400Q96L91 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 TPM3P8-201ENST00000330554 643 ntBASIC20.19■□□□□ 0.82
EP400Q96L91 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EP400Q96L91 AL391280.1-201ENST00000506969 1062 ntBASIC20.19■□□□□ 0.82
EP400Q96L91 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC20.19■□□□□ 0.82
EP400Q96L91 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EP400Q96L91 FZD10-202ENST00000539839 3282 ntBASIC20.19■□□□□ 0.82
EP400Q96L91 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EP400Q96L91 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EP400Q96L91 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EP400Q96L91 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EP400Q96L91 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EP400Q96L91 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EP400Q96L91 RN7SKP214-201ENST00000364208 315 ntBASIC20.18■□□□□ 0.82
EP400Q96L91 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.18■□□□□ 0.82
EP400Q96L91 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.18■□□□□ 0.82
EP400Q96L91 AC018695.7-201ENST00000624587 2492 ntBASIC20.18■□□□□ 0.82
EP400Q96L91 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.18■□□□□ 0.82
EP400Q96L91 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
EP400Q96L91 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 RPL7P35-201ENST00000446943 740 ntBASIC20.18■□□□□ 0.82
EP400Q96L91 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.18■□□□□ 0.82
EP400Q96L91 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.18■□□□□ 0.82
EP400Q96L91 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.18■□□□□ 0.82
EP400Q96L91 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
EP400Q96L91 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.17■□□□□ 0.82
EP400Q96L91 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EP400Q96L91 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 AC243562.2-201ENST00000561247 970 ntBASIC20.17■□□□□ 0.82
EP400Q96L91 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.17■□□□□ 0.82
EP400Q96L91 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC20.17■□□□□ 0.82
EP400Q96L91 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.17■□□□□ 0.82
EP400Q96L91 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.17■□□□□ 0.82
EP400Q96L91 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EP400Q96L91 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.17■□□□□ 0.82
EP400Q96L91 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.17■□□□□ 0.82
EP400Q96L91 MME-218ENST00000625667 363 ntTSL 5 BASIC20.17■□□□□ 0.82
EP400Q96L91 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.17■□□□□ 0.82
EP400Q96L91 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EP400Q96L91 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 AC244250.3-201ENST00000620749 366 ntBASIC20.16■□□□□ 0.82
EP400Q96L91 AL161773.1-201ENST00000624845 863 ntBASIC20.16■□□□□ 0.82
EP400Q96L91 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.16■□□□□ 0.82
EP400Q96L91 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.16■□□□□ 0.82
EP400Q96L91 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
EP400Q96L91 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
EP400Q96L91 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.16■□□□□ 0.82
EP400Q96L91 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.16■□□□□ 0.82
EP400Q96L91 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.16■□□□□ 0.82
EP400Q96L91 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EP400Q96L91 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms