Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.29■□□□□ 0.36
PGBD4Q96DM1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.29■□□□□ 0.36
PGBD4Q96DM1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PGBD4Q96DM1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PGBD4Q96DM1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PGBD4Q96DM1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 U91328.1-201ENST00000437528 223 ntBASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AC132938.2-201ENST00000579188 680 ntBASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 LINC01115-203ENST00000606068 577 ntBASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AL591163.1-201ENST00000641757 987 ntBASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PGBD4Q96DM1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC005052.1-201ENST00000625181 2492 ntBASIC17.27■□□□□ 0.36
PGBD4Q96DM1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 CLK3P2-201ENST00000427566 1453 ntBASIC17.27■□□□□ 0.36
PGBD4Q96DM1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 AL008721.1-201ENST00000609964 604 ntBASIC17.27■□□□□ 0.36
PGBD4Q96DM1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 FER1L4-210ENST00000615531 5998 ntBASIC17.27■□□□□ 0.36
PGBD4Q96DM1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PGBD4Q96DM1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.27■□□□□ 0.35
PGBD4Q96DM1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD4Q96DM1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms