Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.28■□□□□ 0.2
PTCD2Q8WV60 EIF2S2P3-201ENST00000428356 999 ntBASIC16.28■□□□□ 0.2
PTCD2Q8WV60 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 MTND2P9-201ENST00000422293 931 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AL049829.1-201ENST00000465411 156 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 ALG1L8P-201ENST00000533887 760 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 DUX4L27-201ENST00000554796 1261 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AC135178.5-201ENST00000602597 674 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AP001059.3-201ENST00000619053 235 ntBASIC16.27■□□□□ 0.2
PTCD2Q8WV60 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCD2Q8WV60 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTCD2Q8WV60 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 RSL24D1P2-201ENST00000445584 366 ntBASIC16.26■□□□□ 0.19
PTCD2Q8WV60 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCD2Q8WV60 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms