Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 AL080243.2-201ENST00000418783 582 ntBASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 TSSK5P-201ENST00000423978 907 ntBASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 UGT1A2P-201ENST00000454886 866 ntBASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 MIR4745-201ENST00000577608 62 ntBASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.43□□□□□ -0.1
FNDC9Q8TBE3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 AL513523.2-202ENST00000427283 2040 ntBASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 AC004890.2-204ENST00000481968 304 ntBASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 MIR3197-201ENST00000582241 73 ntBASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FNDC9Q8TBE3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms