Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRFBP1Q8NEF9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 TSEN15P1-201ENST00000423257 515 ntBASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 AC025678.2-201ENST00000562061 970 ntBASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 AC105021.1-202ENST00000570572 669 ntBASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRFBP1Q8NEF9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 AC069262.1-201ENST00000539058 672 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 AP001160.2-201ENST00000596071 487 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 AC027612.4-201ENST00000605371 583 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 MIR6080-201ENST00000617359 66 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 AC134407.2-201ENST00000625089 1978 ntBASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRFBP1Q8NEF9 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms