Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 HOMER2P2-201ENST00000451621 847 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RN7SL736P-201ENST00000613111 269 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AC145423.3-201ENST00000615987 467 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AL023775.1-201ENST00000454907 1746 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AC012618.1-201ENST00000461223 412 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 YRDCP1-201ENST00000621419 643 ntBASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC168Q8NDH2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AL603756.1-201ENST00000606511 2163 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AF254983.2-201ENST00000612331 135 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 PP12613-201ENST00000424958 2230 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CROCCP2-202ENST00000412962 2773 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CD8B2-202ENST00000417670 633 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AC005730.2-201ENST00000564549 1184 ntBASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC168Q8NDH2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC168Q8NDH2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC168Q8NDH2 AL138709.1-201ENST00000614840 1693 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms