Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 AP002414.3-201ENST00000589352 1468 ntBASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 FAM210CP-201ENST00000445714 574 ntBASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 AC105339.3-201ENST00000560043 636 ntBASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRTM1Q86UE6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AGAP7P-201ENST00000582299 2062 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AGAP14-201ENST00000624701 2060 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 WASH6P-202ENST00000359512 1437 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AL513480.1-201ENST00000451731 511 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 KRT18P34-201ENST00000488218 1270 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AC002347.1-201ENST00000569543 541 ntBASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 AC005593.1-201ENST00000624894 515 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms