Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC010327.5-201ENST00000586923 3061 ntBASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 KLF4P1-201ENST00000412782 1185 ntBASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 HLA-J-202ENST00000469281 1241 ntBASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 AL513190.1-201ENST00000621254 727 ntBASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 AC004790.2-201ENST00000623588 572 ntBASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 AL671710.1-201ENST00000610245 2349 ntBASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FOXR1Q6PIV2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 AC232323.1-201ENST00000540724 2099 ntBASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 AC148477.5-201ENST00000625164 1645 ntBASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FOXR1Q6PIV2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 CEND1P1-201ENST00000451006 455 ntBASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FOXR1Q6PIV2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms