Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 AC007292.2-201ENST00000593524 1812 ntBASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 KRT8P39-201ENST00000396270 1433 ntBASIC15.43■□□□□ 0.06
PPP4R4Q6NUP7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PCGF3-213ENST00000620529 1899 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 AC026748.1-201ENST00000624349 3251 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PTCHD3P3-201ENST00000403073 906 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 MED15P5-201ENST00000423150 992 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 POLD2P1-201ENST00000511220 997 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 TERC-201ENST00000602385 541 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 AL353135.1-201ENST00000606729 504 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 AC092919.2-201ENST00000623631 1645 ntBASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.42■□□□□ 0.06
PPP4R4Q6NUP7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 AC073621.1-201ENST00000392730 636 ntBASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 KRT18P27-201ENST00000427733 1299 ntBASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms