Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AC092171.3-201ENST00000610122 2651 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 FAM21FP-201ENST00000426241 1131 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AC026954.1-201ENST00000429771 1293 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 KRT18P43-201ENST00000469825 1281 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AC108725.1-201ENST00000495472 409 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 AC016694.1-201ENST00000434179 700 ntBASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 KRT90P-201ENST00000549264 1064 ntBASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 DRD5P1-201ENST00000456605 1438 ntBASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM71Q2Q1W2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 AC106886.4-201ENST00000623557 2502 ntBASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM71Q2Q1W2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms