Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ASIC1P78348 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ASIC1P78348 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ASIC1P78348 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ASIC1P78348 AC068587.6-202ENST00000641839 5619 ntBASIC17.87■□□□□ 0.45
ASIC1P78348 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ASIC1P78348 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.86■□□□□ 0.45
ASIC1P78348 AC211486.1-202ENST00000416371 468 ntBASIC17.86■□□□□ 0.45
ASIC1P78348 AL139010.1-201ENST00000454878 894 ntBASIC17.86■□□□□ 0.45
ASIC1P78348 AC211476.1-201ENST00000503899 468 ntBASIC17.86■□□□□ 0.45
ASIC1P78348 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.86■□□□□ 0.45
ASIC1P78348 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.86■□□□□ 0.45
ASIC1P78348 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.86■□□□□ 0.45
ASIC1P78348 AC004835.2-201ENST00000603762 682 ntBASIC17.86■□□□□ 0.45
ASIC1P78348 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.86■□□□□ 0.45
ASIC1P78348 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.86■□□□□ 0.45
ASIC1P78348 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ASIC1P78348 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.86■□□□□ 0.45
ASIC1P78348 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 PKD1P5-201ENST00000532415 10291 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 AC004987.2-201ENST00000395959 1148 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.85■□□□□ 0.45
ASIC1P78348 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.85■□□□□ 0.45
ASIC1P78348 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.85■□□□□ 0.45
ASIC1P78348 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.85■□□□□ 0.45
ASIC1P78348 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 CYP4F24P-201ENST00000586049 1580 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 AC026979.3-201ENST00000607315 403 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 GPALPP1-207ENST00000611650 899 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 AC092850.2-201ENST00000623821 2697 ntBASIC17.85■□□□□ 0.45
ASIC1P78348 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.85■□□□□ 0.45
ASIC1P78348 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ASIC1P78348 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ASIC1P78348 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
ASIC1P78348 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms