Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABREP78334 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.16■□□□□ 0.02
GABREP78334 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABREP78334 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.16■□□□□ 0.02
GABREP78334 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
GABREP78334 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABREP78334 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.16■□□□□ 0.02
GABREP78334 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GABREP78334 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GABREP78334 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.15■□□□□ 0.02
GABREP78334 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.15■□□□□ 0.02
GABREP78334 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.15■□□□□ 0.02
GABREP78334 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 PFN1P12-201ENST00000455938 534 ntBASIC15.15■□□□□ 0.02
GABREP78334 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.15■□□□□ 0.02
GABREP78334 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 AC108725.1-201ENST00000495472 409 ntBASIC15.15■□□□□ 0.02
GABREP78334 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.15■□□□□ 0.02
GABREP78334 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.15■□□□□ 0.02
GABREP78334 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.15■□□□□ 0.02
GABREP78334 BRI3BPP1-201ENST00000594224 787 ntBASIC15.15■□□□□ 0.02
GABREP78334 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
GABREP78334 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GABREP78334 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
GABREP78334 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GABREP78334 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 AC006538.1-201ENST00000567905 1585 ntBASIC15.15■□□□□ 0.02
GABREP78334 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GABREP78334 AC105020.1-201ENST00000435356 2205 ntBASIC15.15■□□□□ 0.02
GABREP78334 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GABREP78334 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 SOCS2P1-201ENST00000417727 557 ntBASIC15.14■□□□□ 0.01
GABREP78334 AC134915.1-201ENST00000426461 574 ntBASIC15.14■□□□□ 0.01
GABREP78334 RPL13P2-201ENST00000440687 659 ntBASIC15.14■□□□□ 0.01
GABREP78334 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
GABREP78334 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.14■□□□□ 0.01
GABREP78334 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 AP001889.1-201ENST00000525414 633 ntBASIC15.14■□□□□ 0.01
GABREP78334 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 ENPP7P5-201ENST00000541031 1031 ntBASIC15.14■□□□□ 0.01
GABREP78334 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.14■□□□□ 0.01
GABREP78334 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.14■□□□□ 0.01
GABREP78334 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 AC243960.2-201ENST00000600996 747 ntBASIC15.14■□□□□ 0.01
GABREP78334 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms