Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 BCRP2-202ENST00000447763 634 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 AC093433.1-201ENST00000458048 571 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 BCRP6-201ENST00000510112 632 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 BCRP7-201ENST00000511549 544 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 AL033527.4-201ENST00000641026 673 ntBASIC18.7■□□□□ 0.58
RHBDL3P58872 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RHBDL3P58872 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHBDL3P58872 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RHBDL3P58872 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RHBDL3P58872 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RHBDL3P58872 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 BNIP3P42-201ENST00000454982 569 ntBASIC18.69■□□□□ 0.58
RHBDL3P58872 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.69■□□□□ 0.58
RHBDL3P58872 PTP4A1P2-201ENST00000546033 454 ntBASIC18.69■□□□□ 0.58
RHBDL3P58872 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.69■□□□□ 0.58
RHBDL3P58872 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 BNIP3P29-201ENST00000598302 571 ntBASIC18.69■□□□□ 0.58
RHBDL3P58872 AC133552.6-201ENST00000613406 534 ntBASIC18.69■□□□□ 0.58
RHBDL3P58872 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 AC011447.5-201ENST00000616168 564 ntBASIC18.69■□□□□ 0.58
RHBDL3P58872 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RHBDL3P58872 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHBDL3P58872 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.69■□□□□ 0.58
RHBDL3P58872 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.69■□□□□ 0.58
RHBDL3P58872 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.68■□□□□ 0.58
RHBDL3P58872 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.68■□□□□ 0.58
RHBDL3P58872 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.68■□□□□ 0.58
RHBDL3P58872 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.68■□□□□ 0.58
RHBDL3P58872 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 AC107373.2-201ENST00000607735 490 ntBASIC18.68■□□□□ 0.58
RHBDL3P58872 AL022328.1-201ENST00000610050 478 ntBASIC18.68■□□□□ 0.58
RHBDL3P58872 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.68■□□□□ 0.58
RHBDL3P58872 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHBDL3P58872 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RHBDL3P58872 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms