Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3P56703 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 FAM220BP-201ENST00000377689 816 ntBASIC15.13■□□□□ 0.01
WNT3P56703 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.13■□□□□ 0.01
WNT3P56703 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
WNT3P56703 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.13■□□□□ 0.01
WNT3P56703 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 AC106028.4-201ENST00000614509 607 ntBASIC15.13■□□□□ 0.01
WNT3P56703 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.13■□□□□ 0.01
WNT3P56703 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 AL513477.1-201ENST00000602865 2407 ntBASIC15.13■□□□□ 0.01
WNT3P56703 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3P56703 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
WNT3P56703 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.12■□□□□ 0.01
WNT3P56703 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
WNT3P56703 AC004987.2-201ENST00000395959 1148 ntBASIC15.12■□□□□ 0.01
WNT3P56703 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 AC004461.1-201ENST00000412461 403 ntBASIC15.12■□□□□ 0.01
WNT3P56703 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.12■□□□□ 0.01
WNT3P56703 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 AP000842.3-202ENST00000569238 1080 ntBASIC15.12■□□□□ 0.01
WNT3P56703 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 AC093028.1-201ENST00000622998 982 ntBASIC15.12■□□□□ 0.01
WNT3P56703 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
WNT3P56703 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
WNT3P56703 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.12■□□□□ 0.01
WNT3P56703 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 MST1L-201ENST00000442552 2185 ntBASIC15.12■□□□□ 0.01
WNT3P56703 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
WNT3P56703 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3P56703 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3P56703 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
WNT3P56703 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.11■□□□□ 0.01
WNT3P56703 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms