Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EPHB4P54760 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
EPHB4P54760 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 ACTBP11-201ENST00000436287 1126 ntBASIC17.99■□□□□ 0.47
EPHB4P54760 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 AC098859.1-201ENST00000502915 1238 ntBASIC17.99■□□□□ 0.47
EPHB4P54760 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 AC123567.1-201ENST00000548294 1261 ntBASIC17.99■□□□□ 0.47
EPHB4P54760 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 AC008735.3-201ENST00000596646 500 ntBASIC17.99■□□□□ 0.47
EPHB4P54760 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHB4P54760 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.99■□□□□ 0.47
EPHB4P54760 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.99■□□□□ 0.47
EPHB4P54760 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EPHB4P54760 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
EPHB4P54760 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
EPHB4P54760 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 TPRX2P-201ENST00000535362 881 ntBASIC17.98■□□□□ 0.47
EPHB4P54760 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.98■□□□□ 0.47
EPHB4P54760 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.98■□□□□ 0.47
EPHB4P54760 AC004461.2-201ENST00000629517 803 ntBASIC17.98■□□□□ 0.47
EPHB4P54760 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
EPHB4P54760 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 HYMAI-201ENST00000635591 3347 ntBASIC17.98■□□□□ 0.47
EPHB4P54760 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.98■□□□□ 0.47
EPHB4P54760 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.98■□□□□ 0.47
EPHB4P54760 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EPHB4P54760 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
EPHB4P54760 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
EPHB4P54760 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
EPHB4P54760 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
EPHB4P54760 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
EPHB4P54760 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.97■□□□□ 0.47
EPHB4P54760 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
EPHB4P54760 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EPHB4P54760 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.97■□□□□ 0.47
EPHB4P54760 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.97■□□□□ 0.47
EPHB4P54760 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
EPHB4P54760 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
EPHB4P54760 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.97■□□□□ 0.47
EPHB4P54760 TMEM261P1-201ENST00000604899 340 ntBASIC17.97■□□□□ 0.47
EPHB4P54760 WFDC1-204ENST00000613603 549 ntBASIC17.97■□□□□ 0.47
EPHB4P54760 AC068587.10-201ENST00000641210 219 ntBASIC17.97■□□□□ 0.47
EPHB4P54760 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms