Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.6■□□□□ 0.41
PMS1P54277 AC087481.3-201ENST00000602886 1894 ntBASIC17.6■□□□□ 0.41
PMS1P54277 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PMS1P54277 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PMS1P54277 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 AC112693.3-201ENST00000624819 1983 ntBASIC17.59■□□□□ 0.41
PMS1P54277 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.59■□□□□ 0.41
PMS1P54277 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.59■□□□□ 0.41
PMS1P54277 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 BANF1P1-201ENST00000553684 263 ntBASIC17.59■□□□□ 0.41
PMS1P54277 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.59■□□□□ 0.41
PMS1P54277 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.59■□□□□ 0.41
PMS1P54277 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PMS1P54277 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.59■□□□□ 0.41
PMS1P54277 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PMS1P54277 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.58■□□□□ 0.41
PMS1P54277 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PMS1P54277 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PMS1P54277 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PMS1P54277 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PMS1P54277 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PMS1P54277 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.58■□□□□ 0.41
PMS1P54277 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PMS1P54277 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PMS1P54277 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PMS1P54277 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PMS1P54277 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
PMS1P54277 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.58■□□□□ 0.4
PMS1P54277 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.58■□□□□ 0.4
PMS1P54277 AC004461.1-201ENST00000412461 403 ntBASIC17.58■□□□□ 0.4
PMS1P54277 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
PMS1P54277 YBX1P5-201ENST00000509441 847 ntBASIC17.58■□□□□ 0.4
PMS1P54277 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.58■□□□□ 0.4
PMS1P54277 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.58■□□□□ 0.4
PMS1P54277 AC005829.1-201ENST00000570002 483 ntBASIC17.58■□□□□ 0.4
PMS1P54277 MIR4469-201ENST00000583919 79 ntBASIC17.58■□□□□ 0.4
PMS1P54277 AL513210.1-201ENST00000629608 234 ntBASIC17.58■□□□□ 0.4
PMS1P54277 AC023157.3-201ENST00000619086 2088 ntBASIC17.58■□□□□ 0.4
PMS1P54277 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.58■□□□□ 0.4
PMS1P54277 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.58■□□□□ 0.4
PMS1P54277 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
PMS1P54277 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PMS1P54277 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PMS1P54277 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PMS1P54277 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PMS1P54277 GPS2P2-201ENST00000430745 888 ntBASIC17.57■□□□□ 0.4
PMS1P54277 EEF1DP4-201ENST00000446006 880 ntBASIC17.57■□□□□ 0.4
PMS1P54277 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.57■□□□□ 0.4
PMS1P54277 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms