Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE6CP51160 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 KLF2P3-201ENST00000451977 1087 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 AC098859.1-201ENST00000502915 1238 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE6CP51160 SLC25A39P2-201ENST00000537614 270 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.32■□□□□ 0.36
PDE6CP51160 MIR3197-201ENST00000582241 73 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 AC092364.2-202ENST00000597012 1073 ntBASIC17.32■□□□□ 0.36
PDE6CP51160 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE6CP51160 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDE6CP51160 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PDE6CP51160 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6CP51160 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PDE6CP51160 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
PDE6CP51160 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6CP51160 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
PDE6CP51160 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDE6CP51160 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6CP51160 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.31■□□□□ 0.36
PDE6CP51160 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.31■□□□□ 0.36
PDE6CP51160 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 AC125807.1-201ENST00000483097 614 ntBASIC17.31■□□□□ 0.36
PDE6CP51160 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6CP51160 ALG1L8P-201ENST00000533887 760 ntBASIC17.31■□□□□ 0.36
PDE6CP51160 AC051619.7-201ENST00000568314 623 ntBASIC17.31■□□□□ 0.36
PDE6CP51160 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.31■□□□□ 0.36
PDE6CP51160 SPTSSB-204ENST00000617024 1292 ntBASIC17.31■□□□□ 0.36
PDE6CP51160 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6CP51160 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6CP51160 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6CP51160 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6CP51160 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDE6CP51160 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms