Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC1A6P48664 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC1A6P48664 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A6P48664 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC1A6P48664 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC1A6P48664 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 AC023908.3-201ENST00000564211 3047 ntBASIC15.78■□□□□ 0.12
SLC1A6P48664 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC1A6P48664 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.77■□□□□ 0.12
SLC1A6P48664 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SLC1A6P48664 HCG4P8-203ENST00000443049 980 ntBASIC15.77■□□□□ 0.12
SLC1A6P48664 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 AC012640.2-201ENST00000561606 901 ntBASIC15.77■□□□□ 0.12
SLC1A6P48664 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC1A6P48664 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC1A6P48664 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC1A6P48664 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
SLC1A6P48664 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SLC1A6P48664 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 AC073439.1-201ENST00000624121 1774 ntBASIC15.77■□□□□ 0.11
SLC1A6P48664 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC1A6P48664 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC1A6P48664 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC1A6P48664 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC1A6P48664 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 AC007292.2-201ENST00000593524 1812 ntBASIC15.76■□□□□ 0.11
SLC1A6P48664 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 GPX1P2-201ENST00000429271 606 ntBASIC15.76■□□□□ 0.11
SLC1A6P48664 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC1A6P48664 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC1A6P48664 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC1A6P48664 AL078644.1-201ENST00000609881 752 ntBASIC15.76■□□□□ 0.11
SLC1A6P48664 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC1A6P48664 SNX18-202ENST00000343017 3140 ntBASIC15.76■□□□□ 0.11
SLC1A6P48664 WASH6P-202ENST00000359512 1437 ntBASIC15.76■□□□□ 0.11
SLC1A6P48664 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC1A6P48664 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC1A6P48664 AGAP7P-201ENST00000582299 2062 ntBASIC15.75■□□□□ 0.11
SLC1A6P48664 AGAP14-201ENST00000624701 2060 ntBASIC15.75■□□□□ 0.11
SLC1A6P48664 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC1A6P48664 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC1A6P48664 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms