Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 PHGDH-209ENST00000641074 1780 ntBASIC10.7□□□□□ -0.7
PCP4P48539 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
PCP4P48539 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC10.7□□□□□ -0.7
PCP4P48539 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
PCP4P48539 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
PCP4P48539 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 KRT8P45-201ENST00000414328 1447 ntBASIC10.69□□□□□ -0.7
PCP4P48539 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 AL034346.1-201ENST00000568244 1277 ntBASIC10.69□□□□□ -0.7
PCP4P48539 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
PCP4P48539 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 TNRC18P1-201ENST00000502875 3650 ntBASIC10.69□□□□□ -0.7
PCP4P48539 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
PCP4P48539 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PCP4P48539 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.69□□□□□ -0.7
PCP4P48539 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 MYCNOS-202ENST00000641263 1313 ntBASIC10.68□□□□□ -0.7
PCP4P48539 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms