Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATRXP46100 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.43□□□□□ -0.1
ATRXP46100 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.43□□□□□ -0.1
ATRXP46100 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.43□□□□□ -0.1
ATRXP46100 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.43□□□□□ -0.1
ATRXP46100 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 CEP164P1-201ENST00000455142 418 ntBASIC14.43□□□□□ -0.1
ATRXP46100 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.43□□□□□ -0.1
ATRXP46100 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.43□□□□□ -0.1
ATRXP46100 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 AC013467.2-201ENST00000605472 835 ntBASIC14.43□□□□□ -0.1
ATRXP46100 AC100757.4-201ENST00000626934 759 ntBASIC14.43□□□□□ -0.1
ATRXP46100 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.43□□□□□ -0.1
ATRXP46100 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ATRXP46100 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.43□□□□□ -0.1
ATRXP46100 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATRXP46100 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
ATRXP46100 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.42□□□□□ -0.1
ATRXP46100 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 CROCCP2-202ENST00000412962 2773 ntBASIC14.42□□□□□ -0.1
ATRXP46100 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.42□□□□□ -0.1
ATRXP46100 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.42□□□□□ -0.1
ATRXP46100 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 BICD1-207ENST00000551848 1962 ntBASIC14.42□□□□□ -0.1
ATRXP46100 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.42□□□□□ -0.1
ATRXP46100 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.42□□□□□ -0.1
ATRXP46100 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.42□□□□□ -0.1
ATRXP46100 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
ATRXP46100 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ATRXP46100 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATRXP46100 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.42□□□□□ -0.1
ATRXP46100 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ATRXP46100 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.41□□□□□ -0.1
ATRXP46100 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.41□□□□□ -0.1
ATRXP46100 HSPB1P2-201ENST00000448722 546 ntBASIC14.41□□□□□ -0.1
ATRXP46100 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.41□□□□□ -0.1
ATRXP46100 RN7SL11P-201ENST00000471305 293 ntBASIC14.41□□□□□ -0.1
ATRXP46100 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.41□□□□□ -0.1
ATRXP46100 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
ATRXP46100 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.41□□□□□ -0.1
ATRXP46100 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms