Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A3P43003 AP000842.3-202ENST00000569238 1080 ntBASIC14.76□□□□□ -0.05
SLC1A3P43003 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC1A3P43003 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC1A3P43003 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC1A3P43003 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC1A3P43003 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A3P43003 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A3P43003 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A3P43003 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 AC063926.3-201ENST00000624734 5658 ntBASIC14.76□□□□□ -0.05
SLC1A3P43003 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC1A3P43003 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLC1A3P43003 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A3P43003 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A3P43003 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SLC1A3P43003 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC1A3P43003 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.75□□□□□ -0.05
SLC1A3P43003 YBX1P5-201ENST00000509441 847 ntBASIC14.75□□□□□ -0.05
SLC1A3P43003 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 MIR3687-2-201ENST00000577708 61 ntBASIC14.75□□□□□ -0.05
SLC1A3P43003 MIR3687-1-201ENST00000614492 61 ntBASIC14.75□□□□□ -0.05
SLC1A3P43003 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC1A3P43003 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SLC1A3P43003 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC1A3P43003 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC1A3P43003 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A3P43003 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A3P43003 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC1A3P43003 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SLC1A3P43003 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC1A3P43003 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC1A3P43003 GPX1P2-201ENST00000429271 606 ntBASIC14.74□□□□□ -0.05
SLC1A3P43003 AL592309.1-201ENST00000443127 649 ntBASIC14.74□□□□□ -0.05
SLC1A3P43003 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 AC061975.2-201ENST00000581722 295 ntBASIC14.74□□□□□ -0.05
SLC1A3P43003 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC1A3P43003 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC1A3P43003 AC084121.4-201ENST00000641598 221 ntBASIC14.74□□□□□ -0.05
SLC1A3P43003 AF228730.8-201ENST00000642140 221 ntBASIC14.74□□□□□ -0.05
SLC1A3P43003 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms