Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 AL671277.1-201ENST00000429656 993 ntBASIC17.52■□□□□ 0.4
USP8P40818 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.52■□□□□ 0.4
USP8P40818 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.52■□□□□ 0.4
USP8P40818 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.52■□□□□ 0.4
USP8P40818 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.52■□□□□ 0.4
USP8P40818 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.52■□□□□ 0.4
USP8P40818 RARRES2P8-201ENST00000566335 367 ntBASIC17.52■□□□□ 0.4
USP8P40818 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.52■□□□□ 0.4
USP8P40818 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.52■□□□□ 0.4
USP8P40818 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP8P40818 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP8P40818 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP8P40818 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.52■□□□□ 0.39
USP8P40818 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
USP8P40818 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
USP8P40818 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 PMS2P7-201ENST00000506558 1336 ntBASIC17.51■□□□□ 0.39
USP8P40818 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.51■□□□□ 0.39
USP8P40818 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.51■□□□□ 0.39
USP8P40818 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.51■□□□□ 0.39
USP8P40818 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 AL138918.1-201ENST00000568306 659 ntBASIC17.51■□□□□ 0.39
USP8P40818 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP8P40818 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
USP8P40818 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP8P40818 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
USP8P40818 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
USP8P40818 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.5■□□□□ 0.39
USP8P40818 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USP8P40818 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USP8P40818 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 AP000347.1-202ENST00000435868 847 ntBASIC17.5■□□□□ 0.39
USP8P40818 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
USP8P40818 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.5■□□□□ 0.39
USP8P40818 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.5■□□□□ 0.39
USP8P40818 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
USP8P40818 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.5■□□□□ 0.39
USP8P40818 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
USP8P40818 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP8P40818 LINC02447-202ENST00000501888 2146 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms