Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 LAGE3P1-201ENST00000425356 484 ntBASIC19.16■□□□□ 0.66
NCLP19338 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.16■□□□□ 0.66
NCLP19338 SLC25A6P2-201ENST00000497974 877 ntBASIC19.16■□□□□ 0.66
NCLP19338 KRT18P58-201ENST00000527480 1120 ntBASIC19.16■□□□□ 0.66
NCLP19338 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.16■□□□□ 0.66
NCLP19338 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.16■□□□□ 0.66
NCLP19338 AC145285.3-201ENST00000564603 959 ntBASIC19.16■□□□□ 0.66
NCLP19338 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLP19338 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
NCLP19338 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLP19338 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.15■□□□□ 0.66
NCLP19338 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 AC092910.1-201ENST00000482027 1129 ntBASIC19.15■□□□□ 0.66
NCLP19338 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.15■□□□□ 0.66
NCLP19338 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.15■□□□□ 0.66
NCLP19338 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 AC004706.3-202ENST00000621574 984 ntBASIC19.15■□□□□ 0.66
NCLP19338 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLP19338 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCLP19338 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.15■□□□□ 0.66
NCLP19338 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NCLP19338 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.14■□□□□ 0.66
NCLP19338 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
NCLP19338 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NCLP19338 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NCLP19338 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NCLP19338 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.14■□□□□ 0.65
NCLP19338 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.14■□□□□ 0.65
NCLP19338 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.14■□□□□ 0.65
NCLP19338 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NCLP19338 ELK2BP-201ENST00000415014 1224 ntBASIC19.14■□□□□ 0.65
NCLP19338 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.14■□□□□ 0.65
NCLP19338 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.14■□□□□ 0.65
NCLP19338 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.14■□□□□ 0.65
NCLP19338 AC098831.1-202ENST00000438821 336 ntBASIC19.14■□□□□ 0.65
NCLP19338 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NCLP19338 AC105339.3-201ENST00000560043 636 ntBASIC19.14■□□□□ 0.65
NCLP19338 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.14■□□□□ 0.65
NCLP19338 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.14■□□□□ 0.65
NCLP19338 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.14■□□□□ 0.65
NCLP19338 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 ZNF259P1-201ENST00000407656 1365 ntBASIC19.14■□□□□ 0.65
NCLP19338 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCLP19338 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms