Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.17■□□□□ 0.02
NCK1P16333 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
NCK1P16333 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 AL121772.3-201ENST00000610840 674 ntBASIC15.17■□□□□ 0.02
NCK1P16333 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.17■□□□□ 0.02
NCK1P16333 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NCK1P16333 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCK1P16333 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCK1P16333 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 MRPL20P1-201ENST00000400819 433 ntBASIC15.16■□□□□ 0.02
NCK1P16333 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.16■□□□□ 0.02
NCK1P16333 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.16■□□□□ 0.02
NCK1P16333 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.16■□□□□ 0.02
NCK1P16333 AF238378.1-201ENST00000526806 358 ntBASIC15.16■□□□□ 0.02
NCK1P16333 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 OR7E14P-202ENST00000530490 1290 ntBASIC15.16■□□□□ 0.02
NCK1P16333 AP002469.2-201ENST00000531724 424 ntBASIC15.16■□□□□ 0.02
NCK1P16333 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 AC004790.2-201ENST00000623588 572 ntBASIC15.16■□□□□ 0.02
NCK1P16333 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NCK1P16333 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NCK1P16333 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCK1P16333 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NCK1P16333 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCK1P16333 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.15■□□□□ 0.02
NCK1P16333 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCK1P16333 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NCK1P16333 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCK1P16333 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCK1P16333 AC139749.1-202ENST00000617529 3139 ntBASIC15.15■□□□□ 0.02
NCK1P16333 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCK1P16333 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.15■□□□□ 0.02
NCK1P16333 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.15■□□□□ 0.02
NCK1P16333 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.15■□□□□ 0.02
NCK1P16333 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.15■□□□□ 0.02
NCK1P16333 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms