Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC130P13994 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.93■□□□□ 0.3
CCDC130P13994 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC130P13994 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC130P13994 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 FO393414.2-201ENST00000405153 598 ntBASIC16.92■□□□□ 0.3
CCDC130P13994 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC130P13994 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC130P13994 AC004840.1-201ENST00000636359 365 ntBASIC16.92■□□□□ 0.3
CCDC130P13994 AL109936.8-201ENST00000641772 604 ntBASIC16.92■□□□□ 0.3
CCDC130P13994 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CCDC130P13994 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC130P13994 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC130P13994 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC130P13994 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC130P13994 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC130P13994 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC130P13994 AL596257.1-201ENST00000641463 2694 ntBASIC16.91■□□□□ 0.3
CCDC130P13994 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 TSPY16P-201ENST00000449843 468 ntBASIC16.91■□□□□ 0.3
CCDC130P13994 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 MIR4745-201ENST00000577608 62 ntBASIC16.91■□□□□ 0.3
CCDC130P13994 AC025048.3-201ENST00000590609 569 ntBASIC16.91■□□□□ 0.3
CCDC130P13994 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC130P13994 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC130P13994 AC005702.4-201ENST00000618393 416 ntBASIC16.91■□□□□ 0.3
CCDC130P13994 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC130P13994 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC130P13994 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms