Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AL136317.3-201ENST00000618497 906 ntBASIC16.13■□□□□ 0.17
THRAP10827 AP001059.3-201ENST00000619053 235 ntBASIC16.13■□□□□ 0.17
THRAP10827 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.13■□□□□ 0.17
THRAP10827 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
THRAP10827 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
THRAP10827 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THRAP10827 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THRAP10827 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.12■□□□□ 0.17
THRAP10827 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 LINC01225-203ENST00000563550 1244 ntBASIC16.12■□□□□ 0.17
THRAP10827 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.12■□□□□ 0.17
THRAP10827 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.12■□□□□ 0.17
THRAP10827 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 AP001350.2-201ENST00000625104 1094 ntBASIC16.12■□□□□ 0.17
THRAP10827 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
THRAP10827 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
THRAP10827 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
THRAP10827 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.12■□□□□ 0.17
THRAP10827 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 FLJ16779-201ENST00000612722 7638 ntBASIC16.11■□□□□ 0.17
THRAP10827 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 PMS2P4-201ENST00000412466 1052 ntBASIC16.11■□□□□ 0.17
THRAP10827 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.11■□□□□ 0.17
THRAP10827 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 MPDU1-223ENST00000582151 728 ntBASIC16.11■□□□□ 0.17
THRAP10827 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.11■□□□□ 0.17
THRAP10827 AC084121.4-201ENST00000641598 221 ntBASIC16.11■□□□□ 0.17
THRAP10827 AF228730.8-201ENST00000642140 221 ntBASIC16.11■□□□□ 0.17
THRAP10827 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.11■□□□□ 0.17
THRAP10827 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.11■□□□□ 0.17
THRAP10827 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
THRAP10827 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.11■□□□□ 0.17
THRAP10827 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THRAP10827 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THRAP10827 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms