Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC107890.1-201ENST00000422478 521 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC092183.1-201ENST00000469884 875 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC067863.1-201ENST00000494933 530 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC140878.1-201ENST00000565277 250 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 AC092850.2-201ENST00000623821 2697 ntBASIC16.19■□□□□ 0.18
HLA-DQB2P05538 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB2P05538 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 FO538757.1-201ENST00000623083 1397 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 HLA-V-204ENST00000476601 1289 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 AC069120.2-201ENST00000524091 540 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 AC097359.3-201ENST00000603982 1210 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TEX28P1-201ENST00000613479 1221 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TEX28P2-201ENST00000617764 1221 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 AC073592.8-201ENST00000624126 511 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.18■□□□□ 0.18
HLA-DQB2P05538 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQB2P05538 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 TREML5P-201ENST00000421694 576 ntBASIC16.17■□□□□ 0.18
HLA-DQB2P05538 AC092580.3-201ENST00000430932 139 ntBASIC16.17■□□□□ 0.18
HLA-DQB2P05538 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.17■□□□□ 0.18
HLA-DQB2P05538 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms