Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.24□□□□□ -0.13
APOC1P02654 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
APOC1P02654 HAUS4P1-201ENST00000406739 1145 ntBASIC14.24□□□□□ -0.13
APOC1P02654 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 AL591424.1-201ENST00000442569 1213 ntBASIC14.24□□□□□ -0.13
APOC1P02654 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 AC112191.1-201ENST00000523689 701 ntBASIC14.24□□□□□ -0.13
APOC1P02654 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.24□□□□□ -0.13
APOC1P02654 KRT19P2-202ENST00000557173 1012 ntBASIC14.24□□□□□ -0.13
APOC1P02654 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.24□□□□□ -0.13
APOC1P02654 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 AC068137.2-201ENST00000605408 478 ntBASIC14.24□□□□□ -0.13
APOC1P02654 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.24□□□□□ -0.13
APOC1P02654 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 AL009178.2-201ENST00000597278 2719 ntBASIC14.24□□□□□ -0.13
APOC1P02654 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOC1P02654 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC1P02654 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC1P02654 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.23□□□□□ -0.13
APOC1P02654 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.23□□□□□ -0.13
APOC1P02654 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 AC009078.2-202ENST00000463353 338 ntBASIC14.23□□□□□ -0.13
APOC1P02654 AC074386.1-202ENST00000463561 864 ntBASIC14.23□□□□□ -0.13
APOC1P02654 RPL13AP23-201ENST00000480739 586 ntBASIC14.23□□□□□ -0.13
APOC1P02654 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC1P02654 RNA5SP416-201ENST00000516838 111 ntBASIC14.23□□□□□ -0.13
APOC1P02654 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.23□□□□□ -0.13
APOC1P02654 AC034105.1-201ENST00000563488 319 ntBASIC14.23□□□□□ -0.13
APOC1P02654 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.23□□□□□ -0.13
APOC1P02654 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.23□□□□□ -0.13
APOC1P02654 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 AC069224.1-201ENST00000566372 1715 ntBASIC14.23□□□□□ -0.13
APOC1P02654 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOC1P02654 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC1P02654 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms