Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDRT1O95170 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT1O95170 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDRT1O95170 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.35□□□□□ -0.11
CDRT1O95170 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDRT1O95170 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT1O95170 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.35□□□□□ -0.11
CDRT1O95170 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 AC112693.3-201ENST00000624819 1983 ntBASIC14.34□□□□□ -0.11
CDRT1O95170 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 ST20-AS1-201ENST00000560255 4223 ntBASIC14.34□□□□□ -0.11
CDRT1O95170 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT1O95170 AC106795.1-205ENST00000512851 1056 ntBASIC14.34□□□□□ -0.11
CDRT1O95170 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT1O95170 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDRT1O95170 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT1O95170 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 C18orf15-201ENST00000623680 2534 ntBASIC14.34□□□□□ -0.11
CDRT1O95170 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT1O95170 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT1O95170 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.33□□□□□ -0.11
CDRT1O95170 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDRT1O95170 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDRT1O95170 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDRT1O95170 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDRT1O95170 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 PMS2P1-201ENST00000431037 1228 ntBASIC14.33□□□□□ -0.12
CDRT1O95170 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 AL139424.1-201ENST00000607572 797 ntBASIC14.33□□□□□ -0.12
CDRT1O95170 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 AGAP7P-201ENST00000582299 2062 ntBASIC14.33□□□□□ -0.12
CDRT1O95170 AGAP14-201ENST00000624701 2060 ntBASIC14.33□□□□□ -0.12
CDRT1O95170 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDRT1O95170 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.33□□□□□ -0.12
CDRT1O95170 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDRT1O95170 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms