Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.74■□□□□ 0.91
LTN1O94822 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.74■□□□□ 0.91
LTN1O94822 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 AL645728.2-202ENST00000641679 227 ntBASIC20.74■□□□□ 0.91
LTN1O94822 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 AC018735.1-201ENST00000437208 1502 ntBASIC20.74■□□□□ 0.91
LTN1O94822 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 KRT8P14-201ENST00000414254 1442 ntBASIC20.73■□□□□ 0.91
LTN1O94822 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.73■□□□□ 0.91
LTN1O94822 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.73■□□□□ 0.91
LTN1O94822 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.73■□□□□ 0.91
LTN1O94822 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.73■□□□□ 0.91
LTN1O94822 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.73■□□□□ 0.91
LTN1O94822 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LTN1O94822 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.73■□□□□ 0.91
LTN1O94822 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.73■□□□□ 0.91
LTN1O94822 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 AL138799.1-201ENST00000448213 1675 ntBASIC20.73■□□□□ 0.91
LTN1O94822 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.73■□□□□ 0.91
LTN1O94822 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTN1O94822 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.72■□□□□ 0.91
LTN1O94822 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 BTBD6P1-201ENST00000412176 1267 ntBASIC20.72■□□□□ 0.91
LTN1O94822 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.72■□□□□ 0.91
LTN1O94822 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.72■□□□□ 0.91
LTN1O94822 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 AC091271.1-201ENST00000611877 1162 ntBASIC20.72■□□□□ 0.91
LTN1O94822 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.72■□□□□ 0.91
LTN1O94822 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.72■□□□□ 0.91
LTN1O94822 AHCYP2-201ENST00000430630 1300 ntBASIC20.72■□□□□ 0.91
LTN1O94822 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.72■□□□□ 0.91
LTN1O94822 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTN1O94822 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LTN1O94822 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LTN1O94822 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LTN1O94822 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 AC079178.1-201ENST00000420915 656 ntBASIC20.71■□□□□ 0.91
LTN1O94822 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.71■□□□□ 0.91
LTN1O94822 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LTN1O94822 AC025181.2-201ENST00000606994 802 ntBASIC20.71■□□□□ 0.91
LTN1O94822 AC084346.2-201ENST00000607097 949 ntBASIC20.71■□□□□ 0.91
LTN1O94822 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.71■□□□□ 0.91
LTN1O94822 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LTN1O94822 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.71■□□□□ 0.91
LTN1O94822 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.71■□□□□ 0.91
LTN1O94822 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTN1O94822 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms