Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.08■□□□□ 0.16
RFPL1O75677 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 TSEN15P1-201ENST00000423257 515 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 AC074386.1-202ENST00000463561 864 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 KRT18P34-201ENST00000488218 1270 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.08■□□□□ 0.16
RFPL1O75677 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
RFPL1O75677 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.08■□□□□ 0.16
RFPL1O75677 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.08■□□□□ 0.16
RFPL1O75677 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.08■□□□□ 0.16
RFPL1O75677 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.08■□□□□ 0.16
RFPL1O75677 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.08■□□□□ 0.16
RFPL1O75677 AC023141.13-201ENST00000604991 943 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 AC027612.4-201ENST00000605371 583 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 AP001282.1-201ENST00000531301 1499 ntBASIC16.08■□□□□ 0.16
RFPL1O75677 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RFPL1O75677 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RFPL1O75677 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFPL1O75677 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.08■□□□□ 0.16
RFPL1O75677 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.08■□□□□ 0.16
RFPL1O75677 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFPL1O75677 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 AC112693.3-201ENST00000624819 1983 ntBASIC16.07■□□□□ 0.16
RFPL1O75677 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFPL1O75677 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.07■□□□□ 0.16
RFPL1O75677 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 RHOQP3-201ENST00000437982 621 ntBASIC16.07■□□□□ 0.16
RFPL1O75677 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
RFPL1O75677 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.07■□□□□ 0.16
RFPL1O75677 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.07■□□□□ 0.16
RFPL1O75677 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFPL1O75677 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.07■□□□□ 0.16
RFPL1O75677 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.07■□□□□ 0.16
RFPL1O75677 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RFPL1O75677 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFPL1O75677 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.06■□□□□ 0.16
RFPL1O75677 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.06■□□□□ 0.16
RFPL1O75677 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFPL1O75677 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.06■□□□□ 0.16
RFPL1O75677 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.06■□□□□ 0.16
RFPL1O75677 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RFPL1O75677 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.06■□□□□ 0.16
RFPL1O75677 AC025580.3-201ENST00000617932 1424 ntBASIC16.06■□□□□ 0.16
RFPL1O75677 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFPL1O75677 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.06■□□□□ 0.16
RFPL1O75677 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFPL1O75677 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms