Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL390955.2-201ENST00000603032 514 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 TEX28P1-201ENST00000613479 1221 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 TEX28P2-201ENST00000617764 1221 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 AC055876.3-201ENST00000431496 288 ntBASIC15.29■□□□□ 0.04
LCMT2O60294 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.29■□□□□ 0.04
LCMT2O60294 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LCMT2O60294 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.29■□□□□ 0.04
LCMT2O60294 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.29■□□□□ 0.04
LCMT2O60294 AL158211.3-201ENST00000607385 239 ntBASIC15.29■□□□□ 0.04
LCMT2O60294 AC138649.4-201ENST00000612222 287 ntBASIC15.29■□□□□ 0.04
LCMT2O60294 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LCMT2O60294 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.29■□□□□ 0.04
LCMT2O60294 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LCMT2O60294 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.29■□□□□ 0.04
LCMT2O60294 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCMT2O60294 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LCMT2O60294 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 FO393414.2-201ENST00000405153 598 ntBASIC15.28■□□□□ 0.04
LCMT2O60294 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 CYMP-203ENST00000474680 1263 ntBASIC15.28■□□□□ 0.04
LCMT2O60294 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.28■□□□□ 0.04
LCMT2O60294 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 AL590560.3-201ENST00000623350 461 ntBASIC15.28■□□□□ 0.04
LCMT2O60294 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.28■□□□□ 0.04
LCMT2O60294 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.28■□□□□ 0.04
LCMT2O60294 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LCMT2O60294 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCMT2O60294 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
LCMT2O60294 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.04
LCMT2O60294 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCMT2O60294 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.27■□□□□ 0.04
LCMT2O60294 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms