Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX1O43812 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX1O43812 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DUX1O43812 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 AC136604.1-201ENST00000418535 575 ntBASIC15.26■□□□□ 0.03
DUX1O43812 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 AL442647.2-201ENST00000429864 857 ntBASIC15.26■□□□□ 0.03
DUX1O43812 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX1O43812 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX1O43812 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX1O43812 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX1O43812 AC106886.1-201ENST00000568660 600 ntBASIC15.26■□□□□ 0.03
DUX1O43812 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
DUX1O43812 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUX1O43812 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
DUX1O43812 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX1O43812 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DUX1O43812 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX1O43812 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
DUX1O43812 CDC14C-201ENST00000428251 1719 ntBASIC15.26■□□□□ 0.03
DUX1O43812 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX1O43812 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.25■□□□□ 0.03
DUX1O43812 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 HNRNPUP1-201ENST00000554987 333 ntBASIC15.25■□□□□ 0.03
DUX1O43812 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
DUX1O43812 AC017083.2-201ENST00000608069 979 ntBASIC15.25■□□□□ 0.03
DUX1O43812 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.25■□□□□ 0.03
DUX1O43812 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
DUX1O43812 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DUX1O43812 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
DUX1O43812 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX1O43812 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
DUX1O43812 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
DUX1O43812 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX1O43812 TOMM22P5-201ENST00000416399 439 ntBASIC15.24■□□□□ 0.03
DUX1O43812 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
DUX1O43812 AL162726.2-201ENST00000438986 1017 ntBASIC15.24■□□□□ 0.03
DUX1O43812 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX1O43812 FAM86LP-201ENST00000478302 853 ntBASIC15.24■□□□□ 0.03
DUX1O43812 RPL13AP25-201ENST00000484130 612 ntBASIC15.24■□□□□ 0.03
DUX1O43812 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.24■□□□□ 0.03
DUX1O43812 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX1O43812 RAB43P1-201ENST00000561790 589 ntBASIC15.24■□□□□ 0.03
DUX1O43812 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.24■□□□□ 0.03
DUX1O43812 AC015936.2-201ENST00000593177 259 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms