Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 AC099398.1-201ENST00000567919 2776 ntBASIC18.23■□□□□ 0.51
ATP2A1O14983 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2A1O14983 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 MIR1909-201ENST00000411312 80 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2A1O14983 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2A1O14983 FAM86LP-201ENST00000478302 853 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 AC010319.3-201ENST00000597028 470 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 AC097359.3-201ENST00000603982 1210 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 PKD1P5-201ENST00000532415 10291 ntBASIC18.22■□□□□ 0.51
ATP2A1O14983 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A1O14983 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A1O14983 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
ATP2A1O14983 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2A1O14983 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2A1O14983 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 KRT18P64-201ENST00000434946 1219 ntBASIC18.21■□□□□ 0.51
ATP2A1O14983 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.21■□□□□ 0.51
ATP2A1O14983 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2A1O14983 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
ATP2A1O14983 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A1O14983 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A1O14983 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
ATP2A1O14983 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.21■□□□□ 0.5
ATP2A1O14983 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A1O14983 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A1O14983 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2A1O14983 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ATP2A1O14983 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2A1O14983 AL162726.2-201ENST00000438986 1017 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms