Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CDC7O00311 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.72■□□□□ 0.11
CDC7O00311 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
CDC7O00311 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.72■□□□□ 0.11
CDC7O00311 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC7O00311 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDC7O00311 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CDC7O00311 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.72■□□□□ 0.11
CDC7O00311 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 REXO1L1P-202ENST00000608646 1974 ntBASIC15.72■□□□□ 0.11
CDC7O00311 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 AL596257.1-201ENST00000641463 2694 ntBASIC15.72■□□□□ 0.11
CDC7O00311 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC7O00311 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC7O00311 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDC7O00311 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 FAM58DP-201ENST00000428076 619 ntBASIC15.71■□□□□ 0.11
CDC7O00311 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.71■□□□□ 0.11
CDC7O00311 AC005237.2-201ENST00000434368 219 ntBASIC15.71■□□□□ 0.11
CDC7O00311 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.71■□□□□ 0.11
CDC7O00311 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.71■□□□□ 0.11
CDC7O00311 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 AC010327.4-202ENST00000591484 748 ntBASIC15.71■□□□□ 0.11
CDC7O00311 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.71■□□□□ 0.11
CDC7O00311 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDC7O00311 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC7O00311 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.71■□□□□ 0.11
CDC7O00311 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.71■□□□□ 0.11
CDC7O00311 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CDC7O00311 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.71■□□□□ 0.1
CDC7O00311 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDC7O00311 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDC7O00311 AC022532.1-201ENST00000624563 1728 ntBASIC15.71■□□□□ 0.1
CDC7O00311 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDC7O00311 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.71■□□□□ 0.1
CDC7O00311 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
CDC7O00311 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC7O00311 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDC7O00311 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC7O00311 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.7■□□□□ 0.1
CDC7O00311 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDC7O00311 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDC7O00311 AC004987.2-201ENST00000395959 1148 ntBASIC15.7■□□□□ 0.1
CDC7O00311 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 DNAJB3-201ENST00000446806 729 ntBASIC15.7■□□□□ 0.1
CDC7O00311 YBX1P5-201ENST00000509441 847 ntBASIC15.7■□□□□ 0.1
CDC7O00311 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.7■□□□□ 0.1
CDC7O00311 AC093520.2-201ENST00000561830 333 ntBASIC15.7■□□□□ 0.1
CDC7O00311 RARRES2P9-201ENST00000565168 469 ntBASIC15.7■□□□□ 0.1
CDC7O00311 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC7O00311 AL513210.1-201ENST00000629608 234 ntBASIC15.7■□□□□ 0.1
CDC7O00311 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC7O00311 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC7O00311 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC7O00311 CYP4F24P-201ENST00000586049 1580 ntBASIC15.7■□□□□ 0.1
CDC7O00311 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms