Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 RPL37AP1-201ENST00000412502 279 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 HLA-V-204ENST00000476601 1289 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AC073592.8-201ENST00000624126 511 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 AC011477.6-201ENST00000604980 1927 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAI2Q9Y5P3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 KRT8P12-202ENST00000472924 1397 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CRB3P1-201ENST00000449338 276 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 AC097493.3-201ENST00000509725 367 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CR383656.12-201ENST00000549567 513 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 AL158211.3-201ENST00000607385 239 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 AL390754.1-201ENST00000619088 582 ntBASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI2Q9Y5P3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms