Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 Z97205.2-201ENST00000564697 1639 ntBASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 SLC7A15P-201ENST00000424028 1363 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC063926.2-201ENST00000623766 1308 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 MIR648-201ENST00000385046 94 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 MEP1AP4-201ENST00000423244 1087 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC023310.3-201ENST00000557027 670 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC100756.1-201ENST00000562736 682 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AL596325.1-201ENST00000563991 1082 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC138749.3-201ENST00000567691 622 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CHCHD2P3-201ENST00000603038 451 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 AC116165.1-201ENST00000611806 668 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 REXO1L1P-202ENST00000608646 1974 ntBASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00588Q9Y4M8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00588Q9Y4M8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00588Q9Y4M8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00588Q9Y4M8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms