Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP25Q9UHP3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP25Q9UHP3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.41■□□□□ 0.54
USP25Q9UHP3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 AL365330.1-201ENST00000607459 531 ntBASIC18.4■□□□□ 0.54
USP25Q9UHP3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP25Q9UHP3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.4■□□□□ 0.54
USP25Q9UHP3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP25Q9UHP3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
USP25Q9UHP3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 AC245100.5-201ENST00000452108 331 ntBASIC18.39■□□□□ 0.53
USP25Q9UHP3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP25Q9UHP3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP25Q9UHP3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP25Q9UHP3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP25Q9UHP3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms