Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF1Q9UH73 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF1Q9UH73 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF1Q9UH73 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF1Q9UH73 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
EBF1Q9UH73 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.32■□□□□ 0.2
EBF1Q9UH73 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 AP002490.2-201ENST00000524791 560 ntBASIC16.32■□□□□ 0.2
EBF1Q9UH73 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 CTBP2P3-201ENST00000585629 1255 ntBASIC16.32■□□□□ 0.2
EBF1Q9UH73 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 PAUPAR-201ENST00000630360 2965 ntBASIC16.32■□□□□ 0.2
EBF1Q9UH73 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EBF1Q9UH73 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF1Q9UH73 AC105917.1-201ENST00000506637 2539 ntBASIC16.32■□□□□ 0.2
EBF1Q9UH73 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 GGT4P-201ENST00000623672 1708 ntBASIC16.31■□□□□ 0.2
EBF1Q9UH73 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 AL139010.1-201ENST00000454878 894 ntBASIC16.31■□□□□ 0.2
EBF1Q9UH73 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 AC092337.1-201ENST00000568699 1129 ntBASIC16.31■□□□□ 0.2
EBF1Q9UH73 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 TMEM261P1-201ENST00000604899 340 ntBASIC16.31■□□□□ 0.2
EBF1Q9UH73 AL512343.1-201ENST00000605837 169 ntBASIC16.31■□□□□ 0.2
EBF1Q9UH73 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF1Q9UH73 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF1Q9UH73 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms