Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 PKD1P1-201ENST00000458669 6805 ntBASIC17.15■□□□□ 0.34
CNTN3Q9P232 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTN3Q9P232 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTN3Q9P232 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTN3Q9P232 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.34
CNTN3Q9P232 AC018892.3-201ENST00000623986 2499 ntBASIC17.14■□□□□ 0.34
CNTN3Q9P232 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AL596325.1-201ENST00000563991 1082 ntBASIC17.14■□□□□ 0.33
CNTN3Q9P232 RRP7BP-205ENST00000566851 833 ntBASIC17.14■□□□□ 0.33
CNTN3Q9P232 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 AL513523.2-202ENST00000427283 2040 ntBASIC17.14■□□□□ 0.33
CNTN3Q9P232 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CNTN3Q9P232 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTN3Q9P232 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 AC022188.1-201ENST00000620960 1664 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 CDC14C-201ENST00000428251 1719 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 SLED1-202ENST00000512051 380 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 RARRES2P5-201ENST00000564013 466 ntBASIC17.13■□□□□ 0.33
CNTN3Q9P232 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms