Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AC105250.1-201ENST00000509378 2057 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AC005089.1-201ENST00000619486 2241 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AP006288.1-201ENST00000446065 395 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AC087641.1-201ENST00000557561 1021 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 NKAPP1-205ENST00000585790 367 ntBASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCM2LQ9NUG4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 HTR5BP-201ENST00000430851 1154 ntBASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 RFPL4AP1-201ENST00000530883 850 ntBASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AC092364.2-202ENST00000597012 1073 ntBASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 AC107918.4-202ENST00000641623 219 ntBASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCM2LQ9NUG4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCM2LQ9NUG4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms