Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC25A39P2-201ENST00000537614 270 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC026150.2-201ENST00000564693 1156 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC135178.5-201ENST00000602597 674 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TUBB3P1-201ENST00000405796 1332 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 GPS2P2-201ENST00000430745 888 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 KLF2P3-201ENST00000451977 1087 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 AC117500.1-201ENST00000497352 755 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 AC140878.1-201ENST00000565277 250 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 AC051619.7-201ENST00000568314 623 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 AC106028.4-201ENST00000614509 607 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 Z92544.3-201ENST00000624747 417 ntBASIC14.43□□□□□ -0.1
USB1Q9BQ65 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.43□□□□□ -0.1
USB1Q9BQ65 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
USB1Q9BQ65 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms