Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S1PR3Q99500 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
S1PR3Q99500 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
S1PR3Q99500 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 MCCD1P2-201ENST00000423228 335 ntBASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
S1PR3Q99500 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.28□□□□□ -0.28
S1PR3Q99500 MTDHP5-201ENST00000598980 586 ntBASIC13.28□□□□□ -0.28
S1PR3Q99500 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S1PR3Q99500 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.28□□□□□ -0.28
S1PR3Q99500 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.28□□□□□ -0.28
S1PR3Q99500 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.27□□□□□ -0.28
S1PR3Q99500 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.27□□□□□ -0.28
S1PR3Q99500 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.27□□□□□ -0.28
S1PR3Q99500 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.27□□□□□ -0.28
S1PR3Q99500 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
S1PR3Q99500 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
S1PR3Q99500 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
S1PR3Q99500 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.27□□□□□ -0.29
S1PR3Q99500 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.27□□□□□ -0.29
S1PR3Q99500 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.27□□□□□ -0.29
S1PR3Q99500 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
S1PR3Q99500 RARRES2P8-201ENST00000566335 367 ntBASIC13.27□□□□□ -0.29
S1PR3Q99500 AP002472.1-201ENST00000577490 586 ntBASIC13.27□□□□□ -0.29
S1PR3Q99500 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.27□□□□□ -0.29
S1PR3Q99500 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.27□□□□□ -0.29
S1PR3Q99500 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.27□□□□□ -0.29
S1PR3Q99500 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
S1PR3Q99500 AL589702.1-201ENST00000641229 1509 ntBASIC13.27□□□□□ -0.29
S1PR3Q99500 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
S1PR3Q99500 OR2I1P-210ENST00000642037 4691 ntBASIC13.27□□□□□ -0.29
S1PR3Q99500 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms