Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC006011.2-201ENST00000621313 1158 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC022532.1-201ENST00000624563 1728 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 TP73-AS1-210ENST00000637775 1455 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 PMPCAP1-201ENST00000508114 1576 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 MINOS1P3-201ENST00000457048 203 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC096582.2-201ENST00000510860 516 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC093827.2-201ENST00000512654 315 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC097493.4-201ENST00000641197 219 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC148477.5-201ENST00000625164 1645 ntBASIC12.18□□□□□ -0.46
AP1S3Q96PC3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP1S3Q96PC3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms