Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 MIR1909-201ENST00000411312 80 ntBASIC16.02■□□□□ 0.16
SIPA1Q96FS4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIPA1Q96FS4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIPA1Q96FS4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AC005052.1-201ENST00000625181 2492 ntBASIC16.01■□□□□ 0.15
SIPA1Q96FS4 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.01■□□□□ 0.15
SIPA1Q96FS4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 MIR658-201ENST00000385210 100 ntBASIC16.01■□□□□ 0.15
SIPA1Q96FS4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TMEM14DP-201ENST00000422205 345 ntBASIC16.01■□□□□ 0.15
SIPA1Q96FS4 RPL13P2-201ENST00000440687 659 ntBASIC16.01■□□□□ 0.15
SIPA1Q96FS4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
SIPA1Q96FS4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC106886.4-201ENST00000623557 2502 ntBASIC16■□□□□ 0.15
SIPA1Q96FS4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
SIPA1Q96FS4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms